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Mouse Genotyping

Linkage Scans

Mouse linkage scans are performed using the Illumina GigaMUGA array, developed at the University of North Carolina at Chapel Hill under the supervision of Fernando Pardo-Manuel de Villena and Leonard McMillan. The GigaMUGA array consists of >140,000 probes with average spacing of 22.5kb. Selection of probes for this array was based on 159 inbred lines.


A complete description of GigaMUGA can be found at: The Mouse Universal Genotyping Array: from substrains to subspecies. Andrew P Morgan, et al G3, Genes, Genomes, Genetics (2015).


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