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Whole Exome

 

Standard Library Prep

Our standard library prep requires a low input DNA amount and is compatible with formalin-fixed, paraffin-embedded FFPE samples. CIDR has developed a workflow optimized for FFPE samples with reduced DNA input and a DNA repair step.

 

FFPE samples undergo a quality QC step prior to processing. Piloting of sample QC is available.

 

Enrichment Method

     Twist Human Core Exome
     CIDR Custom Exome
         Includes additional regions based on RefSeq and
         OMIM with option to add in MT capture
     Agilent SureSelect Human All Exon + UTR

 

Next Generation Sequencing Platform

     Illumina NovaSeq sequencers

 

 

Services Include

 

CNV detection utilizing “counting” methods are also not likely to be highly successful due to the uneven coverage inherent with enrichment chemistry.

 

 

 


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photo of QC chip

 

QC chip being placed on the instrument