Quality Control Statistics
CIDR is dedicated to producing the highest quality data for our investigators. These cumulative quality control statistics are based on data from 300 released CIDR Program studies consisting of ~380,000 samples. The error rate is calculated from investigator-supplied blind duplicates. SNP genotyping services began in 2005.
Service |
Error Rate |
Missing Rate |
Completed Projects |
| Human GWAS SNP - Illumina | 0.014 | 0.23 | 30 |
| Human Linkage SNP | 0.007 | 0.19 | 54 |
| Human Custom SNP - GoldenGate | 0.009 | 0.18 | 58 |
| Human Custom SNP - iSelect Infinium | 0.0002 | 0.03 | 5 |
| Human MHC SNP | 0.0 | 0.17 | 1 |
| Mouse Linkage SNP | 0.003 | 0.14 | 13 |
| Mouse Custom SNP | 0.0 | 0.08 | 4 |
| Human Linkage STRP* | 0.07 | 3.96 | 109 |
| Mouse Linkage STRP* | 0.06 | 4.7 | 24 |
| Human GWAS SNP - Affymetrix* | 0.19 | 0.28 | 2 |
*CIDR no longer offers STRP or Affymetrix services |
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Programming Staff